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Dataset / CIL:13486, Saccharomyces cerevisiae

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Title
CIL:13486, Saccharomyces cerevisiae
Creator
Kanehara, Kazue
Ng, Davis T.W
Xie, Wei
Date Created and/or Issued
2021
Contributing Institution
UC San Diego, Research Data Curation Program
Collection
Cell Image Library
Rights Information
Under copyright
Constraint(s) on Use: This work is protected by the U.S. Copyright Law (Title 17, U.S.C.). Use of this work beyond that allowed by "fair use" or any license applied to this work requires written permission of the copyright holder(s). Responsibility for obtaining permissions and any use and distribution of this work rests exclusively with the user and not the UC San Diego Library. Inquiries can be made to the UC San Diego Library program having custody of the work.
Use: This work is available from the UC San Diego Library. This digital copy of the work is intended to support research, teaching, and private study.
Rights Holder and Contact
UC Regents
Description
A mutant of the vacuolar proteinase A (ngPrAdelta295-331) (green) is a substrate of ER quality control (ERQC) mechanisms, as determined by the fact that it is retained in the ER (marked by Kar2; red) when degradation is blocked through deletion mutation of hrd1. S. cerevisiae mutant hrd1::KANMX (deletion mutation of hrd1) bearing ngPRdelta295-331-HA centromeric plasmid were fixed in 3.7% formaldehyde. The cell wall was removed by zymolyase digestion in 1.2M sorbitol and washed resuspended cells were applied to poly L-lysine coated slide, methanol (-20C) and acetone treated, and air dried. Primary antibodies HA.11 mAb (Covance) and polyclonal rabbit anti-Kar2p were applied in 0.05% Tween 20 followed by Alexa Fluor 488 goat anti–mouse and Alexa Fluor 594 goat anti–rabbit (Invitrogen) secondary antibodies. Slides were mounted in PBS, 90% glycerol and DAPI (blue). Cells were visualized using an inverted microscope (LSM 510 META; Carl Zeiss, Inc.) with a Plan Apochromat 100× 1.4 NA Ph3 objective (Carl Zeiss, Inc.) in immersion oil (Immersol 518F; Carl Zeiss, Inc.) at room temperature. Image acquisition was performed using standard photomultiplier tube with LSM 510. Images were archived using LSM 5 Image Examiner (Carl Zeiss, Inc.) and Photoshop (version 7.0; Adobe), and no additional software adjustments were performed on images after acquisition other than cropping. Image corresponds to Fig 1D in J Cell Biol. 2010. 188:707-716.
Research Data Curation Program, UC San Diego, La Jolla, 92093-0175 (https://lib.ucsd.edu/rdcp)
Kanehara, Kazue; Xie, Wei; Ng, Davis T.W. (2021). CIL:13486, Saccharomyces cerevisiae. In Cell Image Library. UC San Diego Library Digital Collections. Dataset. https://doi.org/10.6075/J02F7M2J
J Cell Biol. 2010. 188: 707-716. https://www.ncbi.nlm.nih.gov/pubmed/?term=20212318
Type
Dataset
Language
No linguistic content; Not applicable
Subject
Response to unfolded protein
ATPase activity
Endoplasmic reticulum unfolded protein response
SRP-dependent cotranslational protein targeting to membrane, translocation
ATP binding
Unfolded protein binding
ER-associated protein catabolic process
Ubiquitin-protein ligase activity
Zinc ion binding
Nucleus
Hrd1p ubiquitin ligase ERAD-L complex
Endoplasmic reticulum membrane
Endoplasmic reticulum lumen
Hrd1p ubiquitin ligase ERAD-M complex
Saccharomyces cerevisiae
Cell Image Library Group ID: 7401

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